Examples

Welcome to the dynestyx examples page

Getting Started

• Quickstart - Minimal introduction to building models in dynestyx and performing inference
• A Gentle Introduction to Dynestyx - Multi-part tutorials: NumPyro and Bayesian workflow → discrete-time dynestyx → filtering and MLL → pseudomarginal inference → SVI → continuous-time (SDE, L63) → HMMs → hierarchical / mixed-effect inference with plate. These have tons of examples!
• Filtering and marginal likelihood without NumPyro - Use dsx.condition to return filter results directly.
• Differentiable optimization without NumPyro - Optimize filter marginal likelihoods and explicit latent-path log densities with JAX and Optax.

Gallery

• SDEs with Non-Gaussian Observations
• Comparing Different MCMC Algorithms
• HUGE speedups if you assume perfect observations
• SINDy (Sparse identification of non-linear dynamics)
• Continuous-time LTI profile likelihood
• GP prior on drift: learning FitzHugh–Nagumo dynamics
• Using Discretizer to go from continuous-time -> discrete - Coming soon!